Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTLLLAGGLLVLSGCSLLMPTPDPNRAWVDLDTQPDADLAAVEVDDKSWDRTRYFEVDPGTRELTVRYQFTVDPTNIGPVDSPLWRDCQLNLKFKDFSAGQRYRLEAGHIGFRPWAKLYDQDNRELARGREGRCAKV
1T2W Chain:A ((82-120))
------------------------------------------------------YFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLTLITADDYNEKTGVWEKRKIFVATEVK--------------------
General information:
TITO was launched using:
RESULT:
Template:
1T2W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1785 for 152 contacts (-11.7/contact) +
2D Compatibility (PS) -4089 + (NN) -3591 + (LL) 4212
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -7953.0 ( -52.32 by residue)
QMean score : 0.143
(partial model without unconserved sides chains):
PDB file :
Tito_1T2W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T2W-query.scw
PDB file :
Tito_Scwrl_1T2W.pdb
: