Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDNPFATPTAPVQPPAREVPATTQPYAFIAVLALVTCLSFAVSLGIQWYNDIGEIRQRFSEHLQLMAPHWFTGLVFYAAANLLVLHAYREKRQLVEFRPLALLLIGYGLLNLVCGMLAGIGLAPLTLPFYQWVTAQSSYGVWLMAFNEAMSWVYLLLGSLLPL-GLVLLGSRVNSPRLAEGEEARVAAWQVALGAALCFATLCFKLMQFLPYALLRYDEPWLYGLYLSGVALPAALLFGAVCTRLPARLQRFAAGRALLLAVVAMLLWSVALLAVGGGLALLMILGLAPAGIGYTLLVALLGVGLLALLWPIGRLATRWCYADQLAA |
3BN6 Chain:A ((34-95)) | -------------------------------------------------------------------------------------------------------------------------------FPYYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGAR------DFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFETPFQARFVRIQPVAWHNRITLRVELLGC---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23597 for 254 contacts (-92.9/contact) +
2D Compatibility (PS) -6126 + (NN) 3740 + (LL) 17720
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -11263.0 ( -44.34 by residue)
QMean score : -0.175
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