Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSTTSSQKFIARNRAP--RVQIEYDVELYGAEKKVQLPFVMGVMADLA-GKPAEPQAAVADRKFLEIDVDNFDARLKAMKPRVAFNVPNVLTGE-GNLSLDITFESMDDFSPAAVARKVDSLNKLLEARTQLANLLTYMDGKTGAEEMIMKAIKDPALLQALASAPKPKDDEPQA
3J9O Chain:A ((2-135))
-----------AKNKIPNSRLMINYETNVDGVLKKKELPYRVLVVGDLSKGRSVDAKKEFADREVRRVN-NGVDRVLEEMNISFDFEAPNFVSKDPSNLKVNYRIESVKDFRPDAVAKKVPEIRALLEMKEILASFAKDIENNRNL------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3J9O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3147 for 587 contacts (-5.4/contact) +
2D Compatibility (PS) -13110 + (NN) -2066 + (LL) 2976
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -27797.0 ( -47.35 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_3J9O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J9O-query.scw
PDB file :
Tito_Scwrl_3J9O.pdb
: