Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADPSFASGRLGSRLQGSIAMIAEELLRAGRLDDALKALQEQVRSQPSNATLRIFLFQLLAVMGQWARAQNQLKVVGELDASALPMVQTYSTAIDCEALRREVFAGRLTPVILGQPAEWIAPLLQALSLDAEGHGEAAQALREQAFDAAPAVPGRIGEAPFAWLADADTRLGPVLEVIVNGRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGGATVALLPARYAETVEHGDDAARLGRKTEWLDSGLPVGQRLFVTDAGETALFDLRELDFEPTDA
4UQY Chain:A ((5-261))
---------------------IAEELLRAGRLDDALKALQEQVRSQPSNATLRIFLFQLLAVMGQWARAQNQLKVVGELDASALPMVQTYSTAIDCEALRREVFAGRLTPVILGQPAEWIAPLLQALSLDAEGHGEAAQALREQAFDAAPAVPGRIGEAPFAWLADADTRLGPVLEVIVNGRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGGATVALLPARYAETVEHGDDAARLGRKTEWLDSGLPVGQRLFVTDAGETALFDLRELDFEP---
General information:
TITO was launched using:
RESULT:
Template:
4UQY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148813 for 2099 contacts (-70.9/contact) +
2D Compatibility (PS) -28411 + (NN) -15492 + (LL) 1132
1D Compatibility (HY) -34000 + (ID) 12850
Total energy: -238434.0 ( -113.59 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_4UQY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UQY-query.scw
PDB file :
Tito_Scwrl_4UQY.pdb
: