Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYRLHEADLEIPDAWQDQSINIFKLPASGPAREASFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQVFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS
4QJY Chain:A ((168-221))
------------------------------------------------CKYADYIGTVFGRGEGQIPGYDGHQEIEL------ALLKLYEVTGNENYLKLSQYFIDQRGQQPYYFDQEKEARGETEPFWYDGGYRYHQAHIPVR
General information:
TITO was launched using:
RESULT:
Template:
4QJY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7351 for 326 contacts (-22.5/contact) +
2D Compatibility (PS) -5657 + (NN) -1701 + (LL) 3248
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -17911.0 ( -54.94 by residue)
QMean score : 0.106
(partial model without unconserved sides chains):
PDB file :
Tito_4QJY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QJY-query.scw
PDB file :
Tito_Scwrl_4QJY.pdb
: