Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKVAIVLLLLATLVSLFSGLFFLVKDQGHGSRVVNSLTVRVVLAAATLVLVAWGFYSGELNSHAPWHF
4B3G Chain:A ((428-463))
-----------------------------YGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVAR
General information:
TITO was launched using:
RESULT:
Template:
4B3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13204 for 170 contacts (-77.7/contact) +
2D Compatibility (PS) -3799 + (NN) -1939 + (LL) 3272
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -19070.0 ( -112.18 by residue)
QMean score : 0.007
(partial model without unconserved sides chains):
PDB file :
Tito_4B3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B3G-query.scw
PDB file :
Tito_Scwrl_4B3G.pdb
: