Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRWEELSEQPCSLARVLAILGDRWTLLVLRDCFLGVRRFDDFERSLGVTRHVLADRLKRLVEAEILAKVPYQERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG
4GCV Chain:A ((11-145))
----------CPIARSLERVGEWWSILIMRDALQGLRRFDEFSRSLDIAPNMLTRRLNALVEAGLLERQPYSQRP-RYQYVPTAKGEDFRVVLMAFVAWGNRHYAQ-QGQSVQLVERTSGRPVRSFMAALADGRTVPLEQCTVQAGPAASEEMRQRL
General information:
TITO was launched using:
RESULT:
Template:
4GCV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70870 for 829 contacts (-85.5/contact) +
2D Compatibility (PS) -14533 + (NN) -6734 + (LL) 1272
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -104065.0 ( -125.53 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_4GCV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GCV-query.scw
PDB file :
Tito_Scwrl_4GCV.pdb
: