Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGRPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVPLTDGTLLLETPEGDRH-APLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK
3LAG Chain:A ((10-95))
----------IQIDNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIELK
General information:
TITO was launched using:
RESULT:
Template:
3LAG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29809 for 610 contacts (-48.9/contact) +
2D Compatibility (PS) -9391 + (NN) -1620 + (LL) 336
1D Compatibility (HY) -6000 + (ID) 2350
Total energy: -48834.0 ( -80.06 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_3LAG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LAG-query.scw
PDB file :
Tito_Scwrl_3LAG.pdb
: