Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETVRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI
1YEP Chain:A ((1-168))
-SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAK------------------
General information:
TITO was launched using:
RESULT:
Template:
1YEP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91981 for 1271 contacts (-72.4/contact) +
2D Compatibility (PS) -18591 + (NN) -8202 + (LL) 1296
1D Compatibility (HY) -14800 + (ID) 4700
Total energy: -136978.0 ( -107.77 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_1YEP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YEP-query.scw
PDB file :
Tito_Scwrl_1YEP.pdb
: