Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRTWIRNPLAIFTAN--GLDAAGGLVVEDGRIV--ELLGAGQQPAQPCASQFDASRHVVLPGLVNTHHHFYQTLTRAWAPVVNQPLFPWLKTLYPVWARLTPEKLELATKVALAELLLSGCTTAADHHYLFPGGLEQAIDVQAGVVEE---LGMRAMLTRGSMSLGEK-DGGLPPQQTVQEAETILADSERLIARYHQRGDGARVQIALAPCSP-FSVTPEIMRASAEVAARHDVRLHTHLAETLDEEDFCLQRFGLRTVDYLDSVGWLGPRTWLAHGIHFNAEEIRRLGEAGTGICHCPSSNMRLASGICPTVELEAAGAPIGLGVDGSASNDASNMILEARQALYLQRLRYGAERITPELALGWATRGSARLLGRSDIGELAPGKQADLALFKLDELRFSGSHDPLSALLLCAADRADRVMV---GGAWRVVDGAVEGLDLAALIARHRAAASALIAG |
| 2PAJ Chain:A ((12-467)) | ---TLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAPRPGETIVDATDCVIYPAWVNTHHHLFQSLLKGEP----------------FRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMP--FDSSAILFEEAEKLGLRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHSHLS-------------GKSPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNGRL-----PVREMADAGVPVSIGVDGAASNEAADMISEVHMTWLAQRARL----ASIAEVIHWGTAGGARVMGLDEVGKVAVGYAADIAVYRLDDPRYFGLHDP--AIGPVASGGRPSVMALFSAGKRVVVDDLIEGVDIKELGGEARRVVRELLRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202034 for 3446 contacts (-58.6/contact) +
2D Compatibility (PS) -41549 + (NN) -14189 + (LL) 3064
1D Compatibility (HY) -24400 + (ID) 7450
Total energy: -286558.0 ( -83.16 by residue)
QMean score : 0.511
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