Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSNGSSSRRTFLRLAALLLPAGALLGSLPGVRAAARPRKLYLAGPDVFRAD-AVAHGEALKALCARYGFEGLYPLDNALPKQLAEPREQAAWIYRANIGLIERADAVLANLNFFRGAEPDSGTAFEVGYATALGKPVYGYVDDAGSYAERIRRHAPELIGEDPTRDRDGMTLEEFGLPLNLMLAVPATLVVGDAEQALRQLASRRHG
2F2T Chain:A ((10-137))
---------------------------------------RKIYIAGPAVFNPDMGASYYNKVRELLKKENVMPLIPTDNEATEALD--------IRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTSD--------RRNMREKYGS--GVDKDNLRVEGFGLPFNLMLYDGVEVFDSFESAFKYFLANFPS-
General information:
TITO was launched using:
RESULT:
Template:
2F2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36237 for 887 contacts (-40.9/contact) +
2D Compatibility (PS) -13504 + (NN) -8373 + (LL) 3492
1D Compatibility (HY) -11200 + (ID) 2900
Total energy: -68722.0 ( -77.48 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_2F2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F2T-query.scw
PDB file :
Tito_Scwrl_2F2T.pdb
: