Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGYKRDRNLGTYLSRSYEG--------RYVGGFLAAKMTRSHKIGYIASFPIPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALIDQGVDVVFQHTDSPAPIQAAERRGVYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVL-PLNQ--EVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
4P98 Chain:A ((48-308)) | ------------------------------------------------------------------DGADVQIRQGLADPTQAEPVIRQFAARGFDLVVGHGIDVSEPILRVATEFPDVHF-SASG---DATLAERLPPNVDGWTYDFGQLGYLDGFVAGSLRGVEKVGAVGGPQLPFVLATHKGIRAGLKAANPRASYEETYTGRFYDLQKEQEAARGLLDKGAQLLVATDDGRGLGQAAVAGDVPTIGVSAAAGADIKAVNITTA-LDLLPTYQSYLEQIRAGTFGRRFDVLALGNRGIVLTPITAVGDVVPDDLQARVDALSERLASGELRLPNFFE------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113770 for 1963 contacts (-58.0/contact) +
2D Compatibility (PS) -26897 + (NN) -5581 + (LL) 7628
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -155920.0 ( -79.43 by residue)
QMean score : 0.555
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