Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVR--VRIDGGQRRVELLRGAAALRVKRD-ALPFVVEAGEGRARVLGTEFEVR--RGAGATRVTVLQGRVAVSAGTGAG---AAEEVLGAGQQVGFADGKLGRPVAIDAAAALAWRQGWLSFYRRPLAEVLDELARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR |
| 4M0H Chain:A ((28-229)) | ----------------------------------------------------------------------------------------------------------------------------------GEHKQVTLPDGTVVHLNAGTVMRYPTEFTSDIRLVEM-EGEAFFNVMRDEGKPFIVRTRQADVKVLGGSFNVKAYQEDELMAVSVRTGKVEVDMPESVMRLLPNEQII-----VNNTNGEILKKNE-DAQKVTAWLQGGLYFNRTPISSVIHDLERMYNQEIVLDPNVVFDDYIYGEHDNKSLEAVLNAIQYSTGIRYRKEESRIVLYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92829 for 1427 contacts (-65.1/contact) +
2D Compatibility (PS) -20709 + (NN) -2149 + (LL) 11004
1D Compatibility (HY) -12400 + (ID) 2850
Total energy: -119933.0 ( -84.05 by residue)
QMean score : 0.364
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