Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQQHDTHSKAIGYLLWIFGFTGSHRFYYGKPITGTIWFFTFGLFFIGWIIDLFLIPSMDREADRRFQGGNLDYNVAWILLTFLGVLGVHRMYMGKWITGIIYLFTGGLFFLGVLYDFWTLNGQVSERNGPQRI
4ZCL Chain:A ((224-264))
-------------------------------------------------IVDHVPAPDVDLDGPFQMQISQLDYN------SYVGVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLA
General information:
TITO was launched using:
RESULT:
Template:
4ZCL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3012 for 165 contacts (-18.3/contact) +
2D Compatibility (PS) -3874 + (NN) 2436 + (LL) 4184
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -4216.0 ( -25.55 by residue)
QMean score : -0.095
(partial model without unconserved sides chains):
PDB file :
Tito_4ZCL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZCL-query.scw
PDB file :
Tito_Scwrl_4ZCL.pdb
: