Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPQTLTNTNLFIDGVSFAGDVPSLTLPKLAVKTEQYRAGGMDAPVSIDMGLEAMEAKFSTNGARR--EALNFFGLADQSAFNG-----VFRGSFKGQKGASVPVVATLRGLLKEVDPGDWKAGEKAEFKYAVAVSYYKLEVDGREVYEIDPVNGVRAINGVDQLAGMRNDLGL |
| 2NYA Chain:A ((50-132)) | -----------FLPKIMYGKD--RLTQPLLRMKNGKYDKEGEFTPITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAASKLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAEMHPILWSRITNRRLSNQNVTVAVLSTYQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6267 for 328 contacts (-19.1/contact) +
2D Compatibility (PS) -7781 + (NN) 395 + (LL) 792
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -20361.0 ( -62.08 by residue)
QMean score : 0.197
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