Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIARASAHLEDSTEQGAALLRALNQLERDIALHSAIREETGLPSGDEPIRAGDSLPPGLALKRLSEIPLRLDIVRASTEPGAPLQRVRWWRQGKVLYRAASPSGDRLPLPPLAERVA----VLDDVS--RFDIRAWVPGKGWTRLPARSKVRASGLEISLARVTRNGVERYRRVVALQ
4HHJ Chain:A ((396-435))-----------------------------------------------------------------------------------------------------------------------------------------------SGDDCVVKPIDDRFANALLALNDMGKVRKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIG


General information:
TITO was launched using:
RESULT:

Template: 4HHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1230 for 113 contacts (-10.9/contact) +
2D Compatibility (PS) -3494 + (NN) -2244 + (LL) 11220
1D Compatibility (HY) -2400 + (ID) 800
Total energy: 1052.0 ( 9.31 by residue)
QMean score : 0.144

(partial model without unconserved sides chains):
PDB file : Tito_4HHJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HHJ-query.scw
PDB file : Tito_Scwrl_4HHJ.pdb: