Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKELNRDL-NIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
2JHQ Chain:A ((6-224))
------------TWHDVIGNEKQQAYFQQTLQFVESQRQAGKVIYPPAKDVFNAFRFTEFGDVKVVILGQDPYHGPNQAHGLCFSVLPGVKTPPSLVNIYKELAQDIPGFQIPPHGYLQSWAQQGVLLLNTVLTVEQGMAHSHANTGWETFTDRVIDALNQHRNGLIFLLWGSHAQKKGQMIDRQRHHVLMAPHPSPLSAHRGFLGCRHFSKTNQLLQAQGIAPINWQ-PEL
General information:
TITO was launched using:
RESULT:
Template:
2JHQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93844 for 1788 contacts (-52.5/contact) +
2D Compatibility (PS) -23373 + (NN) -12876 + (LL) 920
1D Compatibility (HY) -22800 + (ID) 6450
Total energy: -158423.0 ( -88.60 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_2JHQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JHQ-query.scw
PDB file :
Tito_Scwrl_2JHQ.pdb
: