Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGDDGCPYLCPGTPQRPGYLVE---ALSQVLREPPHFDSLPWPRAVQMVRDGHRDGLVGAYGLD-----GLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 3ZSF Chain:A ((72-267)) | ------------------------------------------TGYDVEVTRAVAEKLGVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADI----KGVKTAQSLTSNYGEKAKAAGA-----QLVPVDG---LAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSA--PADEKVGSGLIVNKGN-DEAVAKFSTAINELKADGTLKKLGEQFFGKDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZSF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55537 for 1380 contacts (-40.2/contact) +
2D Compatibility (PS) -20371 + (NN) -10975 + (LL) 3292
1D Compatibility (HY) -4800 + (ID) 2500
Total energy: -90891.0 ( -65.86 by residue)
QMean score : 0.333
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