Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
3R6W Chain:A ((1-212))
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDN-VAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
General information:
TITO was launched using:
RESULT:
Template:
3R6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118319 for 1677 contacts (-70.6/contact) +
2D Compatibility (PS) -23751 + (NN) -17394 + (LL) -172
1D Compatibility (HY) -26800 + (ID) 10550
Total energy: -196986.0 ( -117.46 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_3R6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R6W-query.scw
PDB file :
Tito_Scwrl_3R6W.pdb
: