Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLEFKKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKGLPGFKAG
2NO8 Chain:A ((3-86))
LKHSISDYTEAEFLEFVKKIC---RAEGATEEDDNKLVREFERLTEHPDGSDLIYYPRDDREDSPEGIVKEIKEWRAANGKSGFKQG
General information:
TITO was launched using:
RESULT:
Template:
2NO8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7430 for 584 contacts (-12.7/contact) +
2D Compatibility (PS) -9174 + (NN) -8560 + (LL) -108
1D Compatibility (HY) -6800 + (ID) 2550
Total energy: -34622.0 ( -59.28 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_2NO8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NO8-query.scw
PDB file :
Tito_Scwrl_2NO8.pdb
: