Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSIKKNLGLLAMTAALAACASNPNDLPDFPEHEYAATQQVGEGVINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLTR
3QEC Chain:A ((6-150))
-------------------------DLPDFPEHEYAATQQVGEGVINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLTR
General information:
TITO was launched using:
RESULT:
Template:
3QEC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25690 for 1030 contacts (-24.9/contact) +
2D Compatibility (PS) -15608 + (NN) -9747 + (LL) 1992
1D Compatibility (HY) -15600 + (ID) 7250
Total energy: -71903.0 ( -69.81 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_3QEC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QEC-query.scw
PDB file :
Tito_Scwrl_3QEC.pdb
: