Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMHPRRLLAVLGVVVLTSMTSCTSFSSSRSSSMDKTGWITHCFGRFLIDLPPDAVINAGYYLWGDRIEYLDDKPTELAARVDRLEQEWRTQRHKSKGNMFLRKIDFGNESVGLLSWSSEVASKTYLLDTYVTSKPTWHVYRWKGKVSVDREQHAVEISRALARNLRSRAPKEIPSEPGFCIDHAYIAGDSFQVERFGVGVTFPEHPGARFEFRSSTGAELNSLLERVDGFVQNMLSTFAGMETLRKGKHP-------VGSLPGEEYLVAGSDKGQRGYTFMWEVQGKEESLTEPNLTAGLAVLERSNENGKPPPPAFKSDKEALELWDTIVDSIRVRPTSSSPRGGNAGPSPAPKPATPGGQTLGDHYVYEEFLSSLKPKDSWLDDL |
| 4PZ2 Chain:A ((110-196)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGSERGRIMARLADLVEEHAGELAALESLDAGKHPAVTRAVDVGNAAGSLRYFAGAADKIHGETLKMPGQFQGHTLREPLGVAGVIIPWNFPSTMFAVKVAPALAAGCALVVKPAEQTPLSALYLAQLAKQAGVPDGVINVVPGFGPTAGAALASHMDVDMVSFTGSTEVGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PZ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8716 for 391 contacts (22.3/contact) +
2D Compatibility (PS) -7806 + (NN) 327 + (LL) 13632
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: 10869.0 ( 27.80 by residue)
QMean score : 0.109
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