Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPVLPLLLSLSLCAPALADWSGPIEQPLWSLPAAPGLSRWLIVHNLSSAAADGLYHVEVLERRQGQQPWQFQRLAAHLALTEQALRASIVAPLKRGGVYPESYQFAYRQWQERQAAGQAPVCRRTVDECLRAPD
1QOQ Chain:B ((169-192))
-------------CNEALADWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTAD
General information:
TITO was launched using:
RESULT:
Template:
1QOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4584 for 88 contacts (-52.1/contact) +
2D Compatibility (PS) -2679 + (NN) -2266 + (LL) 1220
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -10909.0 ( -123.97 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_1QOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QOQ-query.scw
PDB file :
Tito_Scwrl_1QOQ.pdb
: