Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKNARYAWRLSLGGLLLGLLACAVYLLAVPLGFKYGEIQVGHGLEHEGRIAWDAAGVPHIRAQSLEDGYFLLGYSHARDRLWQMEFARRYAGGTLSEVFGAKTLPMDRFARTLGFRRTAEGIYANLDAPTRVLLQRYSDGINAYLELAPAALPLEFSLVRHERPGPWGPVDSLSLHLLYSWTLSANLGMQLQRLALAEHLDLARINEVFAPYPGERPPATRDYASLYRSLHGTPDAGKLLGQLPGSNVEGIGSNNWVVSASRSATGKPLLANDPHLRLTNPAAFYLASLKIPGLSLTGANFAGAPLFV-IGHNQRIAWGYTNTGSHIQDAYLERVDPQDPRRYLTPDGYRPFETRLERIAVRDGETVSLEVRSTRHGPVISDIYEPARLPQAQRDRLVIALAWTGLDRHDKTFPSLLAINRAEGWEQFLDAAANFGVPPQNMVYADVEGNIGYVSAGRVPLRGADDDLHGLAPSPGWESRYDWVGYVPESAKPRSLNPREGFIATANQRIVPPDNAFDFGHDWVLPYRYDRIREWLGGPGQRTLEDSLELQNDEFSSVMASLLPKMLEQVSDPELRASEAF-ALLQGWNHQAAADLAAPLIAGYWVRAFTRELLQPRIGTQLLA--SGWNQRNYDGFLRLILDGQADLRFWCG-----QEQGCDLKLNQSLRRALDELRAAHGSAPSGWKWGEAHAALAEHVPFHKTPLRA--LFDLKNNKGGDNFSVNVGRFDYSDPANPFNTRIAATLRMVIDLADFDNSRYALSTRNSGLPFDGA-TDLNELWARGAYI-------RIADDAPDATDRQLVLRPSASSSGEPRP |
4HSR Chain:B ((1-533)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNNWAVAPGRTATGRPILAGDPHRVFEIPGFYAQHHLACDRFDMIGLTVPGVPGFPHFAHNGKVAYCVTHAFMDIHDLYLEQFAGEG-RTARFGNDFEPVAWSRDRIAVRGGADREFDIVETRHGPVIAG--DP-------RDGAALTLRSVQFAETDLSFDCLTRMPGASTVAQLYDATRGWGLIDHNLVAGDVAGSIGHLVRARVPSRPREN---GWLPVPGWSGEHEWRGWIPHEAMPRVIDPPGGIIVTANNRVVADDHPDYLCTDCHPPYRAERIMKRLVANPAFAVDDAAAIHADTLSP-HVGLLRRRLEALGARDDSAAEGLRQMLVAWDGR--MDAASEVASAY--NAFRRAL------TRLVTDRSGLEQAISHPFAAVAPGVSPQGQVWWAVPTLLRDDDAGMLKGWSWDQALSEALSVASQNLTGRSWGEEHRPRFTHPLATQFPAWAGLLNPASRPIGGDGDTVLANGLVPS--AGPQAT-YGALSRYVFDVGNWDNSRWVVFHGASGHPASAHYADQNAPWSDCAMVPMLYSWDRIAAEA--VTSQELVPA----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HSR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -87251 for 4146 contacts (-21.0/contact) +
2D Compatibility (PS) -55058 + (NN) -31238 + (LL) 17588
1D Compatibility (HY) -20000 + (ID) 8150
Total energy: -184109.0 ( -44.41 by residue)
QMean score : 0.330
|
|
|