Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNAMALTLAGLLAAPSLGFAAAPDAVMVFARQGDKGSVSVGDKHFRTQAFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDTVDEELTADTLKPGASVEGDAIFASEDDAVYGASLVRLSDRCK
3SB3 Chain:A ((5-105))
------------------------DAVMVFARQGDKGSVSVGDKHFRTQAFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDTVDEELTADTLKPGASVEGDAIFASEDDAVYGASLVRLSDRC-
General information:
TITO was launched using:
RESULT:
Template:
3SB3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48626 for 695 contacts (-70.0/contact) +
2D Compatibility (PS) -10679 + (NN) -816 + (LL) 2028
1D Compatibility (HY) -12000 + (ID) 5050
Total energy: -75143.0 ( -108.12 by residue)
QMean score : 0.734
(partial model without unconserved sides chains):
PDB file :
Tito_3SB3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SB3-query.scw
PDB file :
Tito_Scwrl_3SB3.pdb
: