Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGSGHEATSTPPRRSHWRWLRRLLTLAFFVLVPVLLFLLVKNLDWQEVRHALGEYRPATLFLGLLLAAAGYTVFSSFDLLSRYYIGHSLPKRRVFTVAFVCNAFNLNLSSWVGAVALRYRLYSRLGLDIADITRILTFSLVTNWFGYLLLAGILFSCGLPALPPGWKLGSDGLRLIGALLLALAAGYLLACRFARRRAWGWREHRLTLPSWRLAALQGLLGASNWSLMALLLYSLLPHSVDYPSVLAILLISSIAGVITHIPAGLGVLEAVFIALLQGRLSQGVLLAALIGYRVLYFLLPLALACVVYLLLERRAIRLRRKQRRLRQGQA |
| 4MDY Chain:A ((178-213)) | ----------------------------------------------------------------------------------------------------------------------------------------------------LLLGGTLYRGGVQATPPGWR--TDFLTQMGLTVLQVPALIPRDEIASVLDGADVLIWTTESDQDRDALLADPIVAQLAATRRDRNIFTTKELAGAIAFASPLSYPVVADQLPPELARVLG--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12714 for 176 contacts (-72.2/contact) +
2D Compatibility (PS) -3494 + (NN) 3010 + (LL) 17316
1D Compatibility (HY) -2800 + (ID) 800
Total energy: 518.0 ( 2.94 by residue)
QMean score : -0.034
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