Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQTNLDDTLDVLNDLLQTSKDGEAGFHACAE-DLRDPQLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALE---KSLPAEIHQVIERQYQGVLRHHDRVRALRDARA
3OGH Chain:B ((5-153))
---NRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIKDSMSKMA------------DEIVKGSISGYVFEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKHMADWLIQHIPQTT
General information:
TITO was launched using:
RESULT:
Template:
3OGH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7751 for 942 contacts (-8.2/contact) +
2D Compatibility (PS) -14638 + (NN) -7819 + (LL) 1180
1D Compatibility (HY) 400 + (ID) 900
Total energy: -29528.0 ( -31.35 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_3OGH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OGH-query.scw
PDB file :
Tito_Scwrl_3OGH.pdb
: