Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADLKIRNLQKGFDGQAIIKGIDLDVRDREFVVFVGPSGCGKSTLLRLIAGLEEASGGSIALDGTDITDTPPAKRDLAMVFQTYALYPHMTVRRNLSFALDLAGVDKREVAAKVDAAARILELQALLERKPRQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRLELARLHQELAATMIYVTHDQVEAMTLADKVVVLNGGRVEQVGSPLELYHHPANLFVAGFLGTPKMGFLRGHLSRNQGERCEVALECGAR--VGLPLCAGELATGSPVTLGIRPEHLNIARPGHAFQGLLRVAADVSERLGSDSFCHVRADS-GEMLTLRVRGDFAPDYGAPLELGFDPEHCHLFDSNGQALDKRLQQAA |
1Q1E Chain:A ((4-361)) | ---VQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHL---LPSDIADVILEGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGTA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q1E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242579 for 2732 contacts (-88.8/contact) +
2D Compatibility (PS) -38613 + (NN) -21163 + (LL) 1512
1D Compatibility (HY) -40400 + (ID) 9200
Total energy: -350443.0 ( -128.27 by residue)
QMean score : 0.538
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