Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNPKRGAIRELLALLRPFRA-IVAVSIALGMAGGLAITLLLASINNALHSENGLGQ---GVLLSFG----GLCLLALVSSIVSDIGTSYVGQHIIAKLRKELGEKVLSAPIEQIERYRTHRLIPVLTHDIDTI-SDFSFSFTPLAIALTITFGCLGYLAYLSVPM-FLLTVVAIVIGTAAQYLARSRGFKGFYAARDLEDELQKHYTA---IASGAKELRIHRPRRYRMHTGRISETANNIRDLHISSINIFILAKTFGSMLFFVVIGLALTLQAY---WPSSNPAAITGFVMV----LLYMKGPLEQVVTILPIVSRAQVAFQRVAELSERFSSPEPHLLLSEQEAP------DKTVDSLELRDVRYSPPAVEGSEPFHLGPINLRIAQGDIVFIVGENGCGKTTLIKLLLGLYRPQSGEILLNGEPVSAETRDDYRQLFSTIFADYYLFDDLVQGKQASLQNATQYLQRLEIAHK-------VSVMDGNFST------TDLSTGQRKRLALINAWLEERPVLVFDEWAADQDPAFRRVFYTELLPDLKRQGKTIIVISHDDRYFEMADQLIRLSAGKVVKETETA |
3B5Z Chain:A ((14-558)) | ---------RRLWPTIAPFKAGLIVAGIAL-ILNAASDTFMLSLLKPLL--DDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVV--SKRFRSI--SKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQE--VETKRFDKVSNKMRLQGMKMVS----ASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTL------FA-----ILDSEQEKDEGKRVIDRATGDLEFRNVTFTYP---GREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAAL--DELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 105074 for 110685 contacts (0.9/contact) +
2D Compatibility (PS) -46877 + (NN) 12395 + (LL) 2912
1D Compatibility (HY) 8000 + (ID) 1900
Total energy: 79604.0 ( 0.72 by residue)
QMean score : ?
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