Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSKNTICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG--IPCLGLNGGPAFRHSEAFSFQVATDDQAETDRLWNAIVDNGG---------EESACGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAMMTMGRIDIATIEKAFKG
3OMS Chain:A ((9-135))
--QKITTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGP-GKEGTVIHATFTLNGQEFMCIDSYVNHNFTFTPAMSLYVTCETEEEIDTVFHKLAQDGAILMPLGSYPFSKKFGWLNDKYGVSWQLT----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OMS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69925 for 773 contacts (-90.5/contact) +
2D Compatibility (PS) -13162 + (NN) -9674 + (LL) 3680
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -100481.0 ( -129.99 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3OMS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OMS-query.scw
PDB file :
Tito_Scwrl_3OMS.pdb
: