Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPLIGQLYRNNNVVTSIHGRGLINRSVIAIMKAHRFARHRMADDAELSVHETFPILKAMSELKLGAASVDLGKMVAKFKAEGNGRSIEDFVKAELAEVVGKQNGDAREGTDVVLYGFGRIGRLLARILIEKTGGGDGLRLRAIVVRKGAENDLVKR---ASLLRRDSVHGPFDGTITIDEENNTLTANGNLIQVIYSNDPASIDYTQYGIKNALLVDNTGKWRDAEGLGQHLKCPGIDRVVLTAPGKGALKNIVHGINHTDIGADD-KIISAASCTTNAIVPVLKAVNDQYGIVNGHVETVHSYTNDQNLIDNFHKGSRRGRSAPLNMVITETGAATAAAKALPVLKGKLTGNAIRVPTPNVSMAILNLNLEKA-TTREEINEYLRQMAMHSD-----LQKQIDFVSSQEVVSTDFVGSRHAGVVDAEATICNDNRVVLYVWYDNEFGYSCQVVRVMEDMAGVNPPAFPR |
| 2EP7 Chain:A ((9-330)) | --------------------------------------------------------------------------------------------------------------------GFGRIGRSFFR----ASWGREEIEIVAI-------NDLTDAKHLAHLLKYDSVHGIFKGSV--EAKDDSIVVDGKEIKVFAQKDPSQIPWGDLGVD--VVIEATGVFRDRENASKHLQG-GAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPHKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVIDNLVHIAAWYDNEWGYSCRL----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -131046 for 2600 contacts (-50.4/contact) +
2D Compatibility (PS) -33443 + (NN) -11214 + (LL) 11200
1D Compatibility (HY) -21200 + (ID) 6550
Total energy: -192253.0 ( -73.94 by residue)
QMean score : 0.471
|
|
|