Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQRRQQSGFTLIEIMVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDMYKLDNFAYPSTQQGLEALVKKPTGNPQPKNWNKDGYLKKLPVDPWGNPYQYLAPGTKGPFDLYSLGADGKEGGSDNDADIGNWDN
3FU1 Chain:A ((2-110))
-------------------------------AMGNKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPT-NPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDVFTLGADGQEGGEGTGADIGNWN-
General information:
TITO was launched using:
RESULT:
Template:
3FU1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4409 for 765 contacts (5.8/contact) +
2D Compatibility (PS) -12087 + (NN) -12293 + (LL) 3580
1D Compatibility (HY) -8000 + (ID) 3250
Total energy: -27641.0 ( -36.13 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3FU1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FU1-query.scw
PDB file :
Tito_Scwrl_3FU1.pdb
: