Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEPNLRGNGKVALVTGAARGIGLGISAWLIAEGWQVVLADNDRERGARVAEALGEHAWFVAMDVAQEGQVAMSVAEVLGQFGRLDGLVCNAAIANPRNTPLEALSLGEWTRTLAVNLTGPMLLAKYCTPYLRAHNGAIVNIASTRAHQSEPDSEAYAASKGGLLALTHALAASLGPDIRVNALSPGWIDTREAAEREAAPLTELDHDQHLVGRVGTVEDVASLVAWLLSEDAGFVTGQEFLVDGGMTRKMIYLD
3GEG Chain:A ((6-235))
-------------IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHG-DVADPLTLKKFVEYAMEKLQRIDVLVNNACRGS--KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVT---------FTQEDCAAIPAGKVGTPKDISNMVLFLCQQD--FITGETIIVDGGMSKRMIY--
General information:
TITO was launched using:
RESULT:
Template:
3GEG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131699 for 1880 contacts (-70.1/contact) +
2D Compatibility (PS) -24022 + (NN) -6450 + (LL) 1636
1D Compatibility (HY) -19200 + (ID) 4800
Total energy: -184535.0 ( -98.16 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_3GEG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GEG-query.scw
PDB file :
Tito_Scwrl_3GEG.pdb
: