Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPTLPDRSPTSRSVASMREYYSRVLAYIACGASIAAGTYTQYFSYGILWMVPYALLYPHLAYHLGQRFRQHDPRKVTRALLAVDAVHCGLGMALLGFSVVPSLMFLLVLSFTALVIGGLRLLGMALLVSASSALLVAVLVAPPLLGNTPVEVAAVSILFCGLYICITAFFGHQQGLRLAQVRQEIAREQEKAARLARNLAKYLSPQVWEMIFSGKKSVRLETQRKKLTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKYGGTIDKFVGDCVMVFFGDPSTQGAKKDAVAAVSMGIAMRKHMKVLRQQWRAQGITKPLEIRMGINTGYCTVGNFGADTRMDYTIIGREVNLASRLESASEAGEILISHETYSLIKDVIMCRDKGQIAVKGFSRPVQIYQVVDSRRDLGAAPSYVEHELPGFSMYLDTNNIQNYDKERVIQALQQAAERLRDKVIL |
2W01 Chain:A ((435-619)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGGDRRPITILTSDLRGFTSTSEGLNPEEVVKVLNIYFGKMADVITHHGGTIDEFMGDGILVLFGAPTSQ--QDDALRAVACGVEMQLALREVNQQVTGLGL-QPLEMGIGINTGEVVVGNIGSEKRTKYGVVGAQVNLTYRIESYTTGGQIFISSTTLEAAGDRVHVNGNRTVQPKGVKDPVVIWDV------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136634 for 1459 contacts (-93.6/contact) +
2D Compatibility (PS) -20181 + (NN) -11033 + (LL) 23068
1D Compatibility (HY) -17200 + (ID) 3550
Total energy: -165530.0 ( -113.45 by residue)
QMean score : 0.628
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