Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQHRLAAAIALVGLVLSGCDSQTNVELKTPAQKASYGIGLNMGKSLS-----QEGMD-DLDSKAVAKGIEDALGKKKQQLTDEELTEAFAFLQKR----AEERMAAIGDENAKAGKKFLEENGKRDGVTTTASGLQYEIVKKADGPQPKATDVVTVHYEGRLTDGTVFDSSIERGSPIDLPVSGVIPGWVEALQLMHVGEKIKLYIPSELAYGAQSPSPAIPANSVLVFDMELLGIKDPSKPDAEPEAGAAAQPEAKADAKK |
| 1Q6U Chain:A ((16-227)) | ---------------------------FKNDDQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADK-SKLSDQEIEQTLQAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYG-KAGVPGIPPNSTLVFDVELLDVKPAP---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Q6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -49051 for 1354 contacts (-36.2/contact) +
2D Compatibility (PS) -21994 + (NN) -11820 + (LL) 3676
1D Compatibility (HY) -15600 + (ID) 4050
Total energy: -98839.0 ( -73.00 by residue)
QMean score : 0.525
|
|
|