Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQTDKHYFGTLLAQTSRAWRAELDRRLSHLGLSQARWLVLLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIADIEAIAASVRNDVLTGIDESEQALCQQVLLRILANLENR
3DEU Chain:A ((27-157))
--------LGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQ--------KRIKLTEKAEPLIAEMEEVIHKTRGEILAGISSEEIEL----LIKLIAKLEH-
General information:
TITO was launched using:
RESULT:
Template:
3DEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75108 for 742 contacts (-101.2/contact) +
2D Compatibility (PS) -13820 + (NN) -9416 + (LL) 2088
1D Compatibility (HY) -10400 + (ID) 2500
Total energy: -109156.0 ( -147.11 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_3DEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DEU-query.scw
PDB file :
Tito_Scwrl_3DEU.pdb
: