Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAITALPSADGQELTIQIQGRFDFGAHQDFRDAYERVAIT--PRRYVVDLRNATYLDSSALGMLLLLRDHAGGENAQISLANCSPEVRKILAISNFEQLFKIS
1SBO Chain:A ((17-104))
---------------VRVQGDIDAYNSSELKEQLRNFISTTSKKKIVLDLSSVSYMDSAGLGTLVVILKDAKINGKEFILSSLKESISRILKLTHLDKIFKIT
General information:
TITO was launched using:
RESULT:
Template:
1SBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64372 for 610 contacts (-105.5/contact) +
2D Compatibility (PS) -8827 + (NN) -2003 + (LL) 1108
1D Compatibility (HY) -10000 + (ID) 1000
Total energy: -85094.0 ( -139.50 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_1SBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SBO-query.scw
PDB file :
Tito_Scwrl_1SBO.pdb
: