Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGVFLAIGALLPICLAGGALLGYAAVRFRVQGDPVAEQVNALLPQTQCGQCGYPGCKPYAEAIAAGDKINKCPPGGEATIRALADLLDLEPEPLDAAEETPPRVAYIREAECIGCTKCIQACP---VDAIVGAARLMHTVIADECTGCDLCLEPCP-VDCIEMREIPDDVRHWKWPQPSPRLIASDRERAA
1H7W Chain:A ((945-1004))
--------------------------------------------------------------------------------------------------------VAVIDEEMCINCGKCYMTCNDSGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIIDCIRM----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1H7W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51982 for 356 contacts (-146.0/contact) +
2D Compatibility (PS) -5622 + (NN) 1031 + (LL) 7208
1D Compatibility (HY) -7200 + (ID) 1300
Total energy: -57865.0 ( -162.54 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_1H7W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H7W-query.scw
PDB file :
Tito_Scwrl_1H7W.pdb
: