Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDAGVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
4K46 Chain:A ((1-214))
MRIILLGAPGAGKGTQAQFIMAKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDDIILGLVKERIAQDDCAKGFLLDGFPRTIPQADGLKEVGVVVDYVIEFDVADSVIVERMAGRRAHLASGRTYHNVYNPPKVEGKDDVTGEDLVIREDDKEETVLARLGVYHNQTAPLIAYYGK-EAEAGNTQYLKFDGTKAVAEVSAELEKALA
General information:
TITO was launched using:
RESULT:
Template:
4K46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73727 for 1689 contacts (-43.7/contact) +
2D Compatibility (PS) -23360 + (NN) -12391 + (LL) 176
1D Compatibility (HY) -21600 + (ID) 6900
Total energy: -137802.0 ( -81.59 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_4K46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K46-query.scw
PDB file :
Tito_Scwrl_4K46.pdb
: