Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRSPLAWLRLLLAAVLGAFLLGGPLHAAETAATRSPAWAQAVDPSINLYRMSPTLYRSALPNAQSVALLQRLQVKTVVSFIKDDDRAWLGQAPVRVLSLPTHADRVDDAEVLSVLRQLQAAEREGPVLMHCKHGNNRTGLFAAMYRIVVQGWDKQAALEEMQHGGFGDEDDMRDASAYVRGADVDGLRLAMANGECSPSRFAVCHVREWMAQALDRP
4R0T Chain:B ((34-195))
---------------------------------TRSPAWAQAVDPSINLYRMSPTLYRSALPNAQSVALLQRLQVKTVVSFIKDDDRAWLGQAPVRVLSLPTHADRVDDAEVLSVLRQLQAAEREGPVLMHSKHGNNRTGLFAAMYRIVVQGWDKQAALEEMQHGGFGDEDDMRDASAYVRGADVDGLRLAMANG-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4R0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102133 for 1317 contacts (-77.5/contact) +
2D Compatibility (PS) -18234 + (NN) -15155 + (LL) 4904
1D Compatibility (HY) -20000 + (ID) 8050
Total energy: -158668.0 ( -120.48 by residue)
QMean score : 0.767
(partial model without unconserved sides chains):
PDB file :
Tito_4R0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R0T-query.scw
PDB file :
Tito_Scwrl_4R0T.pdb
: