Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRKVFSSQAYRHKVVLVSGGCSGIGRALALRFARAGARLAILDLDQAALDSLVQHLRDHLGGEALGLRCDVADADAVERAVALAVERFGGIDVLVNNAGITHRGTFAETGLGVFRKVMAVNFFGAVHCTRAALPSLLER--RGQIVVLGSLTGFAPLLYRSAYNASKHALHGLFDTLRMELEGTGVSVTLACPGFTATDLRKNALVGDGSVTRQPVQVLGSQVASPVEVAEAIFQGAARRRRLLVLSNVNWRARLLARFFPRLFEKLLVPRLSGLKPQP
3TJR Chain:A ((29-244))
----------FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-GFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNS---------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153670 for 1655 contacts (-92.9/contact) +
2D Compatibility (PS) -21099 + (NN) -12103 + (LL) 6884
1D Compatibility (HY) -11200 + (ID) 3600
Total energy: -194788.0 ( -117.70 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_3TJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJR-query.scw
PDB file :
Tito_Scwrl_3TJR.pdb
: