Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPLMHRFHSFVAASAVAIALCVGTAHAGLIAQGTRVVFPASEREVTLRVSNTSGT-PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYLK--APLPTDRESLFWLNILEVPPRDEDENNALQFSFRSRFKLFFRPSQLKSVDSAAGKLQWKFLESGGAGKKTVVQVNNPTPYYVSF----ASVELIVDGRVMSVGKGMVAPFSTKEFDWQGNPKNMEAASVRYEVINDYGGRNTHDRALGK |
| 1PDK Chain:A ((7-200)) | ----------------------------------TRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQE---KIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSE-KANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGG-----YRIENPTPYYVTVIGLGGSEKQAEEGEFETV---MLSPRSEQTV----KSANYNTPYLSY--INDYGGR--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -51684 for 1227 contacts (-42.1/contact) +
2D Compatibility (PS) -20125 + (NN) -10319 + (LL) 3568
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -95810.0 ( -78.08 by residue)
QMean score : 0.466
|
|
|