Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHRSTGIGVSRWLGGLLGVALALPALALPQGCIELLAQAPRVDVVQGQQRDLRLAVPIERLAIGDPKIADVQLLDRRGFLVTGKEQGSTSLLIWTGCSPEPLRSLVEVEGRGSVDTRGAPAFTVGAAEELPNQVQTDIRFVEVSRSKLKQASTSFVRRGGNLWVLGAPGSLGDIKVNADGSGLGGTFGTGSSGFNLIFGGGKWLSFMNALEGSGFAYTLARPSLVAMSGQSASFLAGGEFPIPVPNGTNDNVTIEYKEFGIRLTLTPTVMNNRRIALKVAPEVSELDYSAGIQSGGVAVPALRVRRTDTSVMLADGESFVISGLTSSNSVSNVDKFPWLGDIPILGAFFRSTKLDKDDRELLMIVTPHLVQPLAADAQLPDLPGEGLRHYDPGFSRLYFLERGEYDGQQNDTGLSD |
3N6R Chain:A ((491-544)) | ------------------------------------------------------------------------------------------------------------------------------------------RVAEIRRTRVSGRMDNHERRVGTEWVVTLQGADFPVTIAADHDGSTVSFDDGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3N6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 384 for 245 contacts (1.6/contact) +
2D Compatibility (PS) -5833 + (NN) -5611 + (LL) 19960
1D Compatibility (HY) -1200 + (ID) 800
Total energy: 6900.0 ( 28.16 by residue)
QMean score : 0.009
|
|
|