Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALLAGGHVLVEGVPGLGKTLLVRAL------ARCFDGGFARIQFTPDLMPSDVTGHAVYDLASEQFKLRKGPV-FTHLLLADEINRAPAKTQAALLEVMQERQVTLEGRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPL-----LKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDD---IKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV |
| 3NBX Chain:X ((5-289)) | -------------HPHLLAERISRLS----SSLEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFS-TPEEVFGPLS----------E-RLTSGYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEADSSL---EALYDRMLIRLWLD---KVQDKANFRSMLTSQQDE-----NDNPVPDALQVTDEEYERWQKEIGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKA-IRLLQASAFFSGRSAVAPVDLILLKDC-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106824 for 1852 contacts (-57.7/contact) +
2D Compatibility (PS) -27314 + (NN) -9557 + (LL) 6116
1D Compatibility (HY) -17600 + (ID) 3450
Total energy: -158629.0 ( -85.65 by residue)
QMean score : 0.461
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