Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSALQPSRSYRITGYSPAISNGYRQRLFSMGLLPGAALRVVRIAPLGDPIQVETRQTSLALRRKDLALLTLVPLD
2LX9 Chain:A ((5-70))
-----PDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAPLGDPIHIETRRVSLVLRKKDLALLEV----
General information:
TITO was launched using:
RESULT:
Template:
2LX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31372 for 385 contacts (-81.5/contact) +
2D Compatibility (PS) -6988 + (NN) -1839 + (LL) 772
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -50577.0 ( -131.37 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_2LX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LX9-query.scw
PDB file :
Tito_Scwrl_2LX9.pdb
: