Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVEAAKNARELLLKEYR-AVLSTHSKKWPGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQLAEEEVAAAAERYYRYFPESADYHR------------VHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLANPFAGEAERGMVEHMNSDHAAAIAHYVELAGLPAHAAAQLAGIDTEGFHLRIGQGLHWLPFPAACGNPGAVRQALVQLARAERWPTVEPEQG |
1VL7 Chain:A ((26-157)) | ------------FIQEFQSAIISTISEQ--GIPNGSYAPFVIDDAKNIYIYVSGLAVHTKNIEANPLVNVLFVDDEAKTNQIFAR-------RRLSFDCTATLIERESQKWNQVVDQFQERFGQIIEVLRGLADFRIFQLTPKEGRFVIGFGA-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VL7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65031 for 812 contacts (-80.1/contact) +
2D Compatibility (PS) -12443 + (NN) 2479 + (LL) 9728
1D Compatibility (HY) -8000 + (ID) 1950
Total energy: -75217.0 ( -92.63 by residue)
QMean score : 0.302
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