Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTLLRRGLLVFLAAFPLLSMAAPTPQQVVQGTVDELLSDIKANKAAYKADPQKLYATLDRILGPVVDAEGIAKSVMTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIRDSKGTVYPVSYTMTNLAGGWKVRNVIINGINIGKLFRDQFADTMQKNRNDLEKTIAGWGEVVAKAKETAKAEEAGAK
2QGU Chain:A ((32-187))
--------------------------QATVKTAVDDVLATIKGDPDLRGGNLQKVFQLVDQKIVPRADFKRTTQ-IAMGRFWSQATPEQQQQIQDGFKSLLIRTYAGALANVRNQTVAYKPFRA-AADDTDVVVRSTVNNNGEPVALDYRVEKSPNGWKVYDINISGLWLSETYKNQFADVISK-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54735 for 1053 contacts (-52.0/contact) +
2D Compatibility (PS) -16820 + (NN) -6236 + (LL) 4796
1D Compatibility (HY) -6000 + (ID) 2150
Total energy: -81145.0 ( -77.06 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2QGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QGU-query.scw
PDB file :
Tito_Scwrl_2QGU.pdb
: