Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFVNTLPLIFGLTAALGSSMALALPSDREQPIRVQADSAELDDKQGVAVYRGDVVVTQGSTKLTGNTVTL----KQDKNGDIEVVTSVGKPAYYEQKPAPDKDVTKAYGLTIQYFVTQNRVVLIDQAKVIQEGNTFEGEKIVYDTQRQIVNAGRATGSQVTSPRPRIDMVIQPKKKAQ
2R19 Chain:A ((28-162))
------------------------VTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPG-QGK----EVIDGYGKPATFYQMQDNGKPV-EGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRVTT----------------
General information:
TITO was launched using:
RESULT:
Template:
2R19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30393 for 951 contacts (-32.0/contact) +
2D Compatibility (PS) -14535 + (NN) -7920 + (LL) 3196
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -59752.0 ( -62.83 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2R19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R19-query.scw
PDB file :
Tito_Scwrl_2R19.pdb
: