Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLLDIKNLSVRFGDTTAVPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLKGRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEEV----LRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKAIPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA |
| 4U00 Chain:A ((4-243)) | --IIRIRNLHKWFG---PLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLED----FQEGEVVVDG---LSVKDDRALREIRREVGMVFQQ--FNLFPHMTV---LENVTLAPMRVRRWPREKA-EKKALELLERVGILDQARK---YPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQG-GMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRVLH------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200522 for 1933 contacts (-103.7/contact) +
2D Compatibility (PS) -25968 + (NN) -13036 + (LL) 4800
1D Compatibility (HY) -21200 + (ID) 4650
Total energy: -260576.0 ( -134.80 by residue)
QMean score : 0.517
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