Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPLLDYLASHPLAFVLCTILLGLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRPWENIPLVSYLALGGKCSSCKAAIGKRYPLVELATALLSGYVAWHFGFTWQAGAMLLLTWGLLAMSLIDADHQLLPDVLVLPLLWLGLIA---NHFGLFASLDDALFGAVFGYLSLWSVFWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESGTPIPFGPYLAIAGWIALLWGDQITRTYLQFAGFK |
2FW5 Chain:A ((28-70)) | -------------------------------------------------------------------------------------------------------------------------------------------------------HMAYPAALLPARSWTALMADLPNHFGEDASLDEASRGQIESYL--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30110 for 175 contacts (-172.1/contact) +
2D Compatibility (PS) -4087 + (NN) -1115 + (LL) 18952
1D Compatibility (HY) 0 + (ID) 900
Total energy: -17260.0 ( -98.63 by residue)
QMean score : 0.157
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